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It's great to hear you are working on an Eclipse plugin. If you access it as a process, have you made sure to pass in ROS_ROOT, ROS_MASTER_URI, and ROS_PACKAGE_PATH? The tools will not function without those set.

In the long run, a lot of the information would be easier to get access to by writing XML-RPC clients that talk to the master, which is how tools like rosnode and rosparam get most of their information.