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bagedit contains a script that does just that: bagmerge.py

$ bag_merge.py --help
usage: bagmerge.py [-h] [-o output_file] [-t topics] [-i] main_bagfile bagfile

Merges two bagfiles.

positional arguments:
  main_bagfile    path to a bagfile, which will be the main bagfile
  bagfile         path to a bagfile which should be merged to the main bagfile

optional arguments:
  -h, --help      show this help message and exit
  -o output_file  name of the output file
  -t topics       topics which should be merged to the main bag
  -i              reindex bagfile

bagedit contains provides a script that does just that: bagmerge.py

$ bag_merge.py --help
usage: bagmerge.py [-h] [-o output_file] [-t topics] [-i] main_bagfile bagfile

Merges two bagfiles.

positional arguments:
  main_bagfile    path to a bagfile, which will be the main bagfile
  bagfile         path to a bagfile which should be merged to the main bagfile

optional arguments:
  -h, --help      show this help message and exit
  -o output_file  name of the output file
  -t topics       topics which should be merged to the main bag
  -i              reindex bagfile