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This is an old one, but I've just been working out the answers to a few of these questions myself so I thought I'd add them here. I'll answer your three questions separately.

  1. The first marker index in the bundle XML file can be any marker on you object, it can but doesn't have to be marker zero. The other marker indices must correspond their the appropriate marker number used.
  2. Status was a bit of mystery until I dug into the source code, it seems there is some support for extra corner features on the objects as well the marker tags but I haven't attempted to get this working yet. From experimentation we've had it working fine with a status of 1 or 2.
  3. I can't help you with this one I'm afraid, we've not experienced this error on our setup.