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So after digging into the https://github.com/ros/diagnostics/tree/indigo-devel/diagnostic_aggregator repository, I found the bug.
Some changes have been made on the diagnostic aggregator, specifically on the topic used to form the bond which is now "/diagnostics_agg/bond" + "add_diags node namespace".
This change has been made on the aggregator itself but only 2 months later on the add_diags script (so bond topic was not matching) and never in the tutorial. I believe the kinetic release to this date has the changes made in the aggregator but not in the add_diags script, hence this bug.
I solved it by using the latest add_diags script on the github until it gets into kinetic.
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