rosserial_arduino Create custom messages from custom messages

edit

I have a messages package that defines several custom messages based on ROS messages. I then have messages that use my custom messages to make other message types. For example:

# Base.msg
float64 data

And then I use Base to make another message type

# BaseVector.msg
Base[] vector_of_data

I find that when I run

$ rosrun rosserial_arduino make_libraries .

Headers cannot be made for messages that are made of custom messages, like BaseVector.msg. I get the following error:

*** Warning, failed to generate libraries for the following packages: ***
    my_custom_messages

Can this problem be fixed or do I need to remake all my messages without using custom messages to define them?

Thank you for your help!

EDIT: My message package CMakeLists.txt

cmake_minimum_required(VERSION 2.8.3)
project(relative_nav_msgs)

find_package(catkin REQUIRED COMPONENTS std_msgs sensor_msgs geometry_msgs nav_msgs message_generation)

## Generate messages in the 'msg' folder
add_message_files(
  FILES
  FilterState.msg
  DesiredVector.msg
  DesiredState.msg
  Edge.msg
  NodeInfo.msg
  VOUpdate.msg
  Keyframe.msg
  Command.msg
  Waypoint.msg
  Path.msg
  Voltage.msg
  Goal.msg

#Optional
  DEBUG_Controller.msg
  Snapshot.msg
)

## Generate added messages and services with any dependencies listed here
generate_messages(
  DEPENDENCIES
  std_msgs
  sensor_msgs
  geometry_msgs
  nav_msgs
)

catkin_package(
#  INCLUDE_DIRS include
#  LIBRARIES relative_nav_msgs
#  CATKIN_DEPENDS geometry_msgs nav_msgs std_msgs
#  DEPENDS system_lib
)

include_directories(
  ${catkin_INCLUDE_DIRS}
)